MERFISH - Mouse Cortex

Spatially resolved profiling of mouse cerebral cortex using multiplexed error-robust fluorescence in situ hybridization (MERFISH).

zenodo_spatial

Info

zenodo_spatial/merfish/mouse_cortex

12.54 MiB

23-09-2024

13221 × 234

Quick links

Description

Spatially resolved profiling of mouse cerebral cortex (visual cortex (VIS), auditory cortex (AUD) and temporal association area (TEa) unexpanded sections) using multiplexed error-robust fluorescence in situ hybridization (MERFISH).

Preview

An AnnData object with n_obs × n_vars = 13221 × 234 with slots:

layers: counts
NameDescriptionTypeData typeSize
var

feature_name

A human-readable name for the feature, usually a gene symbol.vectorobject234
layers

counts

Raw countsdensematrixfloat3213221 × 234
uns

dataset_description

Long description of the dataset.atomicstr1

dataset_id

A unique identifier for the dataset. This is different from the `obs.dataset_id` field, which is the identifier for the dataset from which the cell data is derived.atomicstr1

dataset_name

A human-readable name for the dataset.atomicstr1

dataset_organism

The organism of the sample in the dataset.atomicstr1

dataset_reference

Bibtex reference of the paper in which the dataset was published.atomicstr1

dataset_summary

Short description of the dataset.atomicstr1

dataset_url

Link to the original source of the dataset.atomicstr1

Related Resources and Citations

Loading citations