MERFISH - Human Cortex 2

Spatially resolved profiling of human cerebral cortex using multiplexed error-robust fluorescence in situ hybridization (MERFISH).

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zenodo_spatial/merfish/human_cortex_2

10.53 MiB

23-09-2024

3044 × 3546

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Description

Spatially resolved profiling of human cerebral cortex (middle temopral gyrus) replicate 1 using multiplexed error-robust fluorescence in situ hybridization (MERFISH) (4000 gene panel).

Preview

An AnnData object with n_obs × n_vars = 3044 × 3546 with slots:

layers: counts
NameDescriptionTypeData typeSize
var

feature_name

A human-readable name for the feature, usually a gene symbol.vectorobject3546
layers

counts

Raw countsdensematrixfloat323044 × 3546
uns

dataset_description

Long description of the dataset.atomicstr1

dataset_id

A unique identifier for the dataset. This is different from the `obs.dataset_id` field, which is the identifier for the dataset from which the cell data is derived.atomicstr1

dataset_name

A human-readable name for the dataset.atomicstr1

dataset_organism

The organism of the sample in the dataset.atomicstr1

dataset_reference

Bibtex reference of the paper in which the dataset was published.atomicstr1

dataset_summary

Short description of the dataset.atomicstr1

dataset_url

Link to the original source of the dataset.atomicstr1

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