Tabula muris senis (alpha=1)

Mouse lung cells aggregated from single-cell (Dirichlet alpha=1)

Tabula muris senis (alpha=1)

RankMean scorer2Memory (GB)Runtime (min)CPU (%)NamePaperYearLibrary
10.760.762.1062.33939.60Cell2location (detection_alpha=20, reference hard-coded)2022v0.1
20.760.761.9067.07821.30Cell2location (detection_alpha=200, reference hard-coded)2022v0.1
30.740.745.40107.32920.30Cell2location (detection_alpha=20, reference NB without batch info)2022v0.1
40.740.7413.80113.121,038.60Cell2location, amortised (detection_alpha=20, reference hard-coded)2022v0.1
50.690.695.104.5894.60RCTD2020v2.0.1
60.580.581.5020.321,242.00Stereoscope2020v0.16.4
70.540.540.230.4149.90Non-Negative Least Squares1987v1.9.3
80.380.380.850.46507.80Non-Negative Matrix Factorization (NMF)2009v1.1.3
90.280.282.1043.581,518.50DestVI2022v0.16.4
10-0.18-0.181.301.00901.90Tangram2021v1.0.3
11-0.26-0.2693.506.15115.40SeuratV32019v4.1.1
12-0.59-0.593.703.68559.10NMF-reg2019v1.1.3