Tabula muris senis (alpha=0.5)

Mouse lung cells aggregated from single-cell (Dirichlet alpha=0.5)

Tabula muris senis (alpha=0.5)

RankMean scorer2Memory (GB)Runtime (min)CPU (%)NamePaperYearLibrary
10.830.832.0080.15914.60Cell2location (detection_alpha=20, reference hard-coded)2022v0.1
20.820.822.6057.35895.60Cell2location (detection_alpha=200, reference hard-coded)2022v0.1
30.810.8113.40170.971,163.20Cell2location, amortised (detection_alpha=20, reference hard-coded)2022v0.1
40.810.815.40104.38943.10Cell2location (detection_alpha=20, reference NB without batch info)2022v0.1
50.760.765.105.3087.00RCTD2020v2.0.1
60.680.680.850.18109.60Non-Negative Least Squares1987v1.9.3
70.630.631.4018.571,276.10Stereoscope2020v0.16.4
80.600.600.850.411,332.40Non-Negative Matrix Factorization (NMF)2009v1.1.3
90.450.452.1049.401,488.10DestVI2022v0.16.4
100.170.1770.703.83156.20SeuratV32019v4.1.1
110.110.113.702.671,376.50NMF-reg2019v1.1.3
12-0.21-0.211.300.89940.40Tangram2021v1.0.3