sciCAR Mouse Kidney

11k cells from adult mouse kidney sequenced by sci-CAR, a combinatorial indexing-based co-assay that jointly profiles chromatin accessibility and mRNA.

sciCAR Mouse Kidney

RankMean squared errorkNN Area Under the CurveMemory (GB)Runtime (min)CPU (%)NamePaperCodeYear
10.940.070.940.92743.90Procrustes

v1.9.0

1975
31.000.061.909.10497.00Harmonic Alignment (sqrt CPM)

v0.0

2020
40.980.052.304.5087.30Mutual Nearest Neighbors (log CPM)

v1.12.3

2018
20.970.084.307.1597.80Mutual Nearest Neighbors (log scran)

v1.12.3

2018
51.000.074.307.75386.50Harmonic Alignment (log scran)

v0.0

2020