CITE-seq Cord Blood Mononuclear Cells

8k cord blood mononuclear cells sequenced by CITEseq, a multimodal addition to the 10x scRNA-seq platform that allows simultaneous measurement of RNA and protein.

CITE-seq Cord Blood Mononuclear Cells

RankMean squared errorkNN Area Under the CurveMemory (GB)Runtime (min)CPU (%)NamePaperCodeYear
10.570.210.540.41187.00Procrustes

v1.9.0

1975
31.000.050.664.55397.20Harmonic Alignment (sqrt CPM)

v0.0

2020
20.890.061.905.4015.30Mutual Nearest Neighbors (log CPM)

v1.12.3

2018
51.010.044.307.3362.30Mutual Nearest Neighbors (log scran)

v1.12.3

2018
41.000.064.307.67393.60Harmonic Alignment (log scran)

v0.0

2020