Zebrafish (random split)
Zebrafish (random split)
| Rank | F1 score | Macro F1 score | Accuracy | Memory (GB) | Runtime (min) | CPU (%) | Name | Paper | Code | Year |
|---|---|---|---|---|---|---|---|---|---|---|
| 14 | 0.05 | 0.01 | 0.18 | 1.00 | 0.62 | 27.10 | Majority Vote | v0.6.0 | 2022 | |
| 3 | 0.84 | 0.69 | 0.84 | 1.60 | 2.45 | 230.30 | Logistic regression (log CPM) | v1.1.2 | 2013 | |
| 13 | 0.08 | 0.04 | 0.08 | 1.00 | 1.25 | 14.10 | Random Labels | v0.6.0 | 2022 | |
| 4 | 0.83 | 0.68 | 0.83 | 1.60 | 3.62 | 1,134.40 | Multilayer perceptron (log CPM) | v1.1.2 | 1990 | |
| 9 | 0.79 | 0.63 | 0.79 | 2.50 | 1.78 | 243.80 | K-neighbors classifier (log CPM) | v1.1.2 | 1967 | |
| 5 | 0.80 | 0.68 | 0.81 | 2.10 | 6.00 | 1,008.10 | XGBoost (log CPM) | v1.6.2 | 2016 | |
| 7 | 0.79 | 0.67 | 0.80 | 7.80 | 12.73 | 605.10 | XGBoost (log scran) | v1.6.2 | 2016 | |
| 6 | 0.81 | 0.65 | 0.81 | 8.80 | 15.50 | 106.60 | K-neighbors classifier (log scran) | v1.1.2 | 1967 | |
| 1 | 0.85 | 0.73 | 0.85 | 8.80 | 12.00 | 164.60 | Logistic regression (log scran) | v1.1.2 | 2013 | |
| 2 | 0.84 | 0.70 | 0.84 | 8.80 | 21.05 | 898.00 | Multilayer perceptron (log scran) | v1.1.2 | 1990 | |
| 11 | 0.58 | 0.32 | 0.67 | 3.40 | 105.88 | 1,147.00 | scArches+scANVI (Seurat v3 2000 HVG) | v0.17.1 | 2021 | |
| 8 | 0.79 | 0.52 | 0.82 | 3.30 | 96.70 | 1,155.00 | scANVI (Seurat v3 2000 HVG) | v0.17.1 | 2021 | |
| 10 | 0.77 | 0.50 | 0.80 | 5.00 | 190.13 | 909.00 | scANVI (All genes) | v0.17.2 | 2021 | |
| 12 | 0.52 | 0.29 | 0.63 | 5.80 | 247.00 | 1,032.50 | scArches+scANVI (All genes) | v0.17.2 | 2021 |