Tabula Muris Senis Lung (random split)

All lung cells from Tabula Muris Senis, a 500k cell-atlas from 18 organs and tissues across the mouse lifespan. Split into train/test randomly.

Tabula Muris Senis Lung (random split)

RankF1 scoreMacro F1 scoreAccuracyMemory (GB)Runtime (min)CPU (%)NamePaperCodeYear
140.060.010.201.400.7329.10Majority Vote

v0.6.0

2022
130.080.020.081.400.7532.00Random Labels

v0.6.0

2022
50.860.760.873.601.67243.80K-neighbors classifier (log CPM)

v1.1.2

1967
40.930.760.932.501.32192.00Logistic regression (log CPM)

v1.1.2

2013
20.930.780.932.603.32963.50Multilayer perceptron (log CPM)

v1.1.2

1990
60.870.690.872.906.101,667.20XGBoost (log CPM)

v1.6.2

2016
70.860.720.876.7017.68631.60XGBoost (log scran)

v1.6.2

2016
30.930.750.938.5013.37258.90Logistic regression (log scran)

v1.1.2

2013
80.800.680.808.5012.30108.40K-neighbors classifier (log scran)

v1.1.2

1967
10.940.790.948.5012.62331.70Multilayer perceptron (log scran)

v1.1.2

1990
100.710.250.774.9041.151,313.40scANVI (Seurat v3 2000 HVG)

v0.17.1

2021
110.630.200.725.60119.08386.60scArches+scANVI (All genes)

v0.17.1

2021
90.780.360.834.80190.871,535.00scANVI (All genes)

v0.17.1

2021
120.610.200.717.1041.701,432.60scArches+scANVI (Seurat v3 2000 HVG)

v0.17.2

2021