Tabula Muris Senis Lung

All lung cells from Tabula Muris Senis, a 500k cell-atlas from 18 organs and tissues across the mouse lifespan. Here we use just 10x data from lung. 24540 cells × 16160 genes across 3 time points.
Raw Scaled
RankNameMean scoreMean-squared errorMean-squared errorPoisson lossPoisson lossMemory (GB)Runtime (min)CPU (%)PaperYearLibrary
1MAGIC (approximate, reversed normalization)0.640.180.300.030.987.807.40137.802018v3.0.0
2MAGIC (reversed normalization)0.640.180.300.030.988.2012.90111.702018v3.0.0
3ALRA (sqrt norm)0.470.27-0.040.030.9839.3038.05100.902018v1.0.0
4MAGIC (approximate)0.400.180.300.120.502.6010.13121.802018v3.0.0
5MAGIC0.400.180.300.120.508.208.52126.802018v3.0.0
6DCA0.070.220.180.21-0.046.9015.881,750.002019v0.3.4
7KNN smoothing0.050.230.130.21-0.038.207.00128.202022v3.0.0
8ALRA (log norm)-0.120.28-0.070.24-0.1746.7027.28101.002018v1.0.0
9Iterative KNN smoothing-4.730.230.141.93-9.6028.109.47477.802018v2.0