Pancreas (by batch)

Human pancreatic islet scRNA-seq data from 6 datasets across technologies (CEL-seq, CEL-seq2, Smart-seq2, inDrop, Fluidigm C1, and SMARTER-seq).

Pancreas (by batch)

RankMean scoreHVG conservationMemory (GB)Runtime (min)CPU (%)NamePaperYearLibrary
10.250.253.305.58294.10Combat (hvg/unscaled)2007v1.9.1
2-0.03-0.034.206.071,057.90MNN (hvg/unscaled)2018v0.1.9.5
3-0.07-0.0720.3050.531,715.70SCALEX (hvg)2022v1.0.2
4-0.36-0.365.403.42247.50FastMNN feature (hvg/unscaled)2019v1.12.3
5-0.36-0.365.405.23179.40FastMNN feature (hvg/scaled)2019v1.12.3
6-0.38-0.387.006.38997.00MNN (hvg/scaled)2018v0.1.9.5
7-0.46-0.463.702.13711.00Combat (hvg/scaled)2007v1.9.1
8-0.47-0.475.309.02578.30Scanorama gene output (hvg/scaled)2019v1.7
9-0.48-0.484.808.23645.70Scanorama gene output (hvg/unscaled)2019v1.7
10-0.53-0.5313.903.82448.10Combat (full/unscaled)2007v1.9.1
11-0.56-0.56314.8039.051,652.90MNN (full/unscaled)2018v0.1.9.5
12-0.61-0.6126.5084.801,274.90SCALEX (full)2022v1.0.2
13-0.81-0.8118.2013.60122.20FastMNN feature (full/unscaled)2019v1.12.3
14-0.81-0.8124.2016.28106.60FastMNN feature (full/scaled)2019v1.12.3
15-0.85-0.85428.3055.701,433.00MNN (full/scaled)2018v0.1.9.5
16-0.86-0.8632.7022.751,374.70Scanorama gene output (full/scaled)2019v1.7
17-0.87-0.8728.009.20538.40Scanorama gene output (full/unscaled)2019v1.7
18-0.90-0.9018.7010.68366.90Combat (full/scaled)2007v1.9.1